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Service Information and Rates

 

Oligo Synthesis (Shipping and Handling)

Peptide Synthesis (Shipping and Handling)

Gene Expression

Mass Spectrometry

Real-Time PCR

Surface Plasmon Resonance (Biacore)

Pyrosequencing

Next Generation Sequencing

 

DNA (Sanger) Sequencing & Fragment Analysis (GeneScan)

Single Cell Genomics

RNA/DNA QC
   • Agilent Bioanalyzer QC
   • AATI Fragment Analyzer QC

** We only accept PTAs or Purchase Orders as a form of payment. We are currently not set up for any credit card transactions **


 

* Base rates are listed for each service. Stanford Facilities and Administrative (F&A) costs will be added on the invoice accordingly.
Stanford F&A Cost Rates
SU Affiliate
8%
Non-Profit and Commercial
57.4%
GENOMIC SERVICES
Oligo Synthesis (top)
On Campus
*SU Affiliate

plus 8% (F&A)
*Non-Profit

plus 57.4% (F&A)

*Commercial

plus 57.4% (F&A)
• DNA (per base):
• 40nmole (standard scale)
• 200nmole
• 1µmole
• DNA bulk orders (per base):
• 40nmole (8-15 oligos/order)
• 40nmole (16-23 oligos/order)
• 40nmole or 25nmole (≥24 oligos/order)
• 25nmole - 96-well plate format by request (≥48 oligos/order)
• RNA (per base):
• 40nmole
• 200nmole
• 1umole
• Purification (per oligo):
• 40nmole and 200nmole synthesis scales
• 1umole scale
• Modification:
• Biotin -- (**For any orders with 3 or more modifications/order, please inquire.)
• TagMan Probe reporters and quenchers
• Inosine
• dU
• 5' Phosphorylation
• 5' Thiolation
• Internal mixed bases
• Phosphothiolation (antisense)
• Other modifications
• Gene Synthesis
**Shipping and Handling :
• USA
• International
0.40
1.00
2.16

0.33
0.28
0.13
0.13

7.60
9.75
Inquire
10.50
22

53
Inquire
11
11

11

Inquire
Inquire
no charge
Inquire
Inquire
no charge
58
0.40
1.00
2.16

0.33
0.28
0.13
0.13

7.60
9.75
Inquire
10.50
22

53
Inquire
11
11

11

Inquire
Inquire
no charge
Inquire
Inquire
no charge
58
0.40
1.00
2.16

0.33
0.28
0.13
0.13

7.60
9.75
Inquire
10.50
22

53
Inquire
11
11
11
Inquire
Inquire
no charge
Inquire
Inquire
34
58
0.50
1.20
2.60

0.40
0.34
0.16
0.16

9.30
11.75
Inquire
12.80
27

65
Inquire
14
14
14
Inquire
Inquire
no charge
Inquire
Inquire
34
58
Gene Expression (top)
On Campus
*SU Affiliate

plus 8% (F&A)
*Non-Profit

plus 57.4% (F&A)

*Commercial

plus 57.4% (F&A)
Expression Analysis: Full Services (** Chip is not included **)  
3' Array:
-- cDNA synthesis to data acquisition; includes Bioanalyzer QC
.
Standard (>50ng): using Affymetrix 3' IVT Plus protocol.
Small (500pg - 50ng): using Affymetrix 3' IVT Pico protocol
• Gene Array:
-- Whole Transcript (WT) Sense Target Labeling to data acquisition.
Standard (>50ng): using Affymetrix WT Plus protocol.
Small (500pg - 2ng): using Affymetrix WT Pico protocol.
• Human Transcriptome Array 2.0 (HTA 2.0)/Mouse Transcriptome Array 1.0 (MTA 1.0)/Rat Transcriptome Array 1.0 (RTA 1.0)
-- Interrogates exons for coding transcripts, exon-exon splice junctions and non-coding transcripts.
• miRNA Array:
-- miRNA coverage of 71 organisms, including human, mouse, rat, canine, and rhesus macaque
.


470
495
455
460

525

210


470
495
455
460

525

210


470
495
455
460

525

210


570
595
555
560
635
260
Other Services  
Hybridization and Scanning (** Chip is not included **)
103
103
103
127
Real-Time PCR (top)
On Campus
*SU Affiliate

plus 8% (F&A)
*Non-Profit

plus 57.4% (F&A)

*Commercial

plus 57.4% (F&A)
• Instrument run: (per plate)
-- Client prepares plate ready to run
• Full Service: (per sample)
• Set-up fee (per order) -- Prices do not include primers
• Reverse Transcription -- (Bioanalyzer QC included)
• qPCR (triplicate) -- using either Taqman or SybrGreen Chemistry
• Custom Assay -- Taqman qPCR optimization
• Custom Assay -- SybrGreen qPCR optimization
35
Inquire
44
19
Inquire
Inquire
35
Inquire
44
19
Inquire
Inquire
35
Inquire
44
19
Inquire
Inquire
43
Inquire
53
22
Inquire
Inquire
Pyrosequencing/PyroMark (top)
On Campus
*SU Affiliate

plus 8% (F&A)
*Non-Profit

plus 57.4% (F&A)

*Commercial

plus 57.4% (F&A)
New Project Consultation
• PCR and Pyrosequencing Run/Sample (one target region):
• first 11 samples (per sample charge per order)
• additional sample (per sample charge per order)
Run Only:
-- PAN captures biotinylated product and runs client generated PCR products
.
• first 11 samples (per sample charge per order)
• additional sample (per sample charge per order)

Self Service: Instrument Run Only
-- Client prepares and runs plate; Reagents and consumables are not included but can be purchased from PAN.

Inquire
32
12


24
10
30
Inquire
32
12


24
10
30
Inquire
32
12


24
10
30
Inquire
42
15


27
12
36
Next Generation Sequencing (top)
On Campus
*SU Affiliate

plus 8% (F&A)
*Non-Profit

plus 57.4% (F&A)

*Commercial

plus 57.4% (F&A)
Library Prep Services: (Price per Preparation including QC)
Low Input RNA Library Preparation:
• Clontech SMARTer Stranded Total RNA-Seq
• Clontech SMART-Seq v4 Ultra Low or Pico RNA-Seq
• NuGen/Nextera
RNA Library Preparation:
• Illumina TruSeq Stranded Total RNA
• Illumina TruSeq Stranded mRNA
DNA Library Preparation:
• DNAflex
• Nextera XT DNA
Targeted Sequence: (Does not include kit)

16S Microbiome Amplicon-Seq
• MiSeq Services:
MiSeq Run Only:
--
Client provides MiSeq reagent kit with samples preloaded into the cartridge.
• 2 x 75 cycles
• 2 x 150 cycles
• 2 x 250 cycles
• 2 x 300 cycles
• Micro 300 cycles
• Nano 300 cycles
• Nano 500 cycles
MiSeq Full Service: Set-up and Run
-- PAN provides MiSeq reagent kit and initial sample QC on Agilent 2100 Bioanalyzer.
• 2 x 75 cycles
• 2 x 150 cycles
• 2 x 250 cycles
• 2 x 300 cycles
• Micro 300 cycles
• Nano 300 cycles
• Nano 500 cycles

294
294
320

253
232

196
232
79
155


304
381
536
654
381
304
309


1236
1391
1700
1905
670
515
618

294
294
320

253
232

196
232
79
155


304
381
536
654
381
304
309


1236
1391
1700
1905
670
515
618

294
294
320

253
232

196
232
79
155


304
381
536
654
381
304
309


1236
1391
1700
1905
670
515
618

360
360
380

304
283

235
252
95
185


386
484
680
819
484
386
397


1390
1545
1905
2111
803
618
742
DNA Sequencing & Fragment Analysis (top)
On Campus
*SU Affiliate

plus 8% (F&A)
*Non-Profit

plus 57.4% (F&A)

*Commercial

plus 57.4% (F&A)
• DNA (Sanger) Sequencing:
Per Sample Price:
Full Service
Intermediate Service (Clean-up & Run)
Economy Service (Run Only)
Per Plate Price:
• Full Service
• Run Only
• Fragment Analysis (GeneScan):
Clean-up and Run
Run only

8.00
5.75
4.75

580
208

9.50
6.90

8.00
5.75
4.75

580
208

9.50
6.90

8.00
5.75
4.75

580
208

9.50
6.90

9.50
7.00
5.75

620
258

11.00
7.80
Single Cell Genomics (top)
On Campus
*SU Affiliate

plus 8% (F&A)
*Non-Profit

plus 57.4% (F&A)

*Commercial

plus 57.4% (F&A)
• Fluidigm C1:
Instrument Run Only:
-- Client provides Chip, C1 Single Cell Auto Prep Reagents, SMARTer Ultra Low RNA reagents and sample QC
Full Service: Single Cell Capture and cDNA Amplification (** Chip is not included **)
-- PAN provides Single Cell Auto Prep Reagents, SMARTer Ultra Low RNA reagents and sample QC
• 96 Cell Chip
• 800 Cell Chip
NexteraXT cDNA Library Prep (per sample)
Library Prep Services: (Price per Preparation including QC)
• Ultralow Input RNA-Seq: (Clontech SMART-Seq kit)
• Illumina/Biorad ddSEQ Single-Cell RNA-Seq kit
• scATAC-Seq
BD Rhapsody Single-cell Assays
Spatial Transcriptomics
200

975
Inquire
47

Inquire
Inquire
Inquire
Inquire
Inquire
200

975
Inquire
47

Inquire
Inquire
Inquire
Inquire
Inquire
200

975
Inquire
47

Inquire
Inquire
Inquire
Inquire
Inquire
250

1200
Inquire
57

Inquire
Inquire
Inquire
Inquire
Inquire
RNA-DNA QC (top)
On Campus
*SU Affiliate

plus 8% (F&A)
*Non-Profit

plus 57.4% (F&A)

*Commercial

plus 57.4% (F&A)
Agilent Bioanalyzer QC (per sample)
RNA:
• Nano RNA (up to 12 samples)
         ° each additional sample
• Pico RNA (up to 11 samples)
         ° each additional sample
• Small RNA (up to 121 samples)
         ° each additional sample
DNA:
• HS DNA (up to 11 samples)
         ° each additional sample
• DNA 1000 (up to 12 samples)
         ° each additional sample
AATI Fragment Analyzer QC (per 96-well - plate format only)
Full Service:
-- PAN provides reagents and runs samples
• HS NGS DNA, HS Large Fragment DNA or RNA
• Small RNA
Run Only :
-- Client provides reagents and PAN runs samples
Investigator Use:
-- Client provides reagents and runs samples; Training & Expertise required


18
15
21
17.75
25
20

25
20
20
17



450
640

120
95


18
15
21
17.75
25
20

25
20
20
17



450
640

120
95


18
15
21
17.75
25
20

25
20
20
17



450
640

120
95


22
18
25
21
30
24

30
24
25
21



505
710

135
105
PROTEIN SERVICES
Peptide Synthesis (top)
(Non-purified peptide synthesis includes analytical HPLC and Mass spec QC)
On Campus
*SU Affiliate

plus 8% (F&A)
*Non-Profit

plus 57.4% (F&A)

*Commercial

plus 57.4% (F&A)
• 0.1 mmol Scale: (~100mg) - non purified
• Set-up fee (includes first 5 Amino Acids)
• Per additional Amino Acid (>5 AA)
• 0.2 mmol Scale: (200mg - 500mg) - non purified
• Set-up fee (includes first 5 Amino Acids)
• Per additional Amino Acid (>5 AA)
• Special Modification Coupling Fee
• HPLC Purification
• Modification
**Shipping and Handling :
• USA
• International
190
41
285
59
59
296
Inquire
no charge
58
190
41
285
59
59
296
Inquire
no charge
58

190
41

285
59
59
296
Inquire
34
58

240
51

360
74
74
372
Inquire
34
58
Mass Spectrometry (top)
On Campus
*SU Affiliate

plus 8% (F&A)
*Non-Profit

plus 57.4% (F&A)

*Commercial

plus 57.4% (F&A)
• Mass spectrometry by MALDI: (per sample)
• Peptides (500-5000Da)
• Other (including proteins, DNA, polymer, small molecules)
• Prespotted plate
• Zip Tip Cleanup

22
38
15
18

22
38
15
18

22
38
15
18

33
58
22
26
Surface Plasmon Resonance -- Biacore (top)
(Experimental set-up includes generation of biosensor surfaces for ligand capturing: Direct or indirect capture)
On Campus
*SU Affiliate

plus 8% (F&A)
*Non-Profit

plus 57.4% (F&A)

*Commercial

plus 57.4% (F&A)
• Set-up fee (per chip, user provides chip)
• Experiment:
• Full-day duration
• Half-day duration
• User-operated instrument session (per hour)
• Biacore 3000
• T200
• User-operated instrument session (per day)
• Biacore 3000
• T200
• Consulting or data analysis (half-day duration)
320
565
283

77
105

410
525
290
320
565
283

77
105

410
525
290
320

565
283

77
105

410
525
290
475

855
428

115
155

615
780
435


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