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Service Information and Rates

Genomic Services
  
Protein Services

Oligo Synthesis (Shipping and Handling)

Peptide Synthesis (Shipping and Handling)

Gene Expression

Mass Spectrometry

Real-Time PCR

Surface Plasmon Resonance (Biacore)

Pyrosequencing

Next Generation Sequencing

 

DNA (Sanger) Sequencing & Fragment Analysis (GeneScan)

Single Cell Genomics

RNA/DNA QC
   • Agilent Bioanalyzer QC
   • Fragment Analyzer QC
   • Femto Pulse QC

** We only accept PTAs or Purchase Orders as a form of payment. We are currently not set up for any credit card transactions **

 

* Base rates are listed for each service. Stanford Facilities and Administrative (F&A) costs will be added on the invoice accordingly.
Stanford F&A Cost Rates
SU Affiliate
8%
Non-Profit and Commercial
54%
GENOMIC SERVICES
Oligo Synthesis (top)
On Campus
*SU Affiliate

plus 8% (F&A)
*Non-Profit

plus 54% (F&A)
*Commercial

plus 54% (F&A)
• DNA (per base):
• 40nmole (standard scale)
• 200nmole
• 1µmole
• DNA bulk orders (per base):
• 40nmole (8-15 oligos/order)
• 40nmole (16-23 oligos/order)
• 40nmole or 25nmole (≥24 oligos/order)
• 25nmole - 96-well plate format by request (≥48 oligos/order)
• RNA (per base):
• 40nmole
• 200nmole
• 1umole
• Purification (per oligo):
• 40nmole and 200nmole synthesis scales
• 1umole scale
• Modification:
• Biotin -- (**For any orders with 3 or more modifications/order, please inquire.)
• TagMan Probe reporters and quenchers
• Inosine
• dU
• 5' Phosphorylation
• 5' Thiolation
• Internal mixed bases
• Phosphothiolation (antisense)
• Other modifications
• Gene Synthesis
**Shipping and Handling :
• USA
• International
0.42
1.15
2.38

0.35
0.30
0.14
0.14

8.30
10.70
18.70
12.50
27.50

56
Inquire
11.50
11.50

11.50
Inquire
Inquire
no charge
Inquire
Inquire
NA
75
0.42
1.15
2.38

0.35
0.30
0.14
0.14

8.30
10.70
18.70
12.50
27.50

56
Inquire
11.50
11.50

11.50
Inquire
Inquire
no charge
Inquire
Inquire
NA
75
0.42
1.15
2.38

0.35
0.30
0.14
0.14

8.30
10.70
18.70
12.50
27.50

56
Inquire
11.50
11.50
11.50
Inquire
Inquire
no charge
Inquire
Inquire
43
75
0.53
1.39
2.85

0.42
0.36
0.17
0.17

10.30
12.85
22.60
15.98
34

68
Inquire
14.80
14.80
14.80
Inquire
Inquire
no charge
Inquire
Inquire
43
75
Gene Expression (top)
On Campus
*SU Affiliate

plus 8% (F&A)
*Non-Profit

plus 54% (F&A)
*Commercial

plus 54% (F&A)
Expression Analysis: Full Services (** Chip is not included **)  
• Affymetrix microarrays -Target preparation to data acquisition; includes Bioanalyzer QC
Inquire
Inquire
Inquire
Inquire
• Hybridization and Scanning (** Chip is not included **)
115
115
115
141
Real-Time PCR (top)
On Campus
*SU Affiliate

plus 8% (F&A)
*Non-Profit

plus 54% (F&A)
*Commercial

plus 54% (F&A)
• Instrument run: (per plate)
-- Client prepares plate ready to run
• Full Service: (per sample)
• Set-up fee (per order) -- Prices do not include primers
• Reverse Transcription -- (Bioanalyzer QC included)
• qPCR (triplicate) -- using either Taqman or SybrGreen Chemistry
• Custom Assay -- Taqman qPCR optimization
• Custom Assay -- SybrGreen qPCR optimization
49
Inquire
59
28
Inquire
Inquire
49
Inquire
59
28
Inquire
Inquire
49
Inquire
59
28
Inquire
Inquire
61
Inquire
71
30
Inquire
Inquire
Pyrosequencing/PyroMark (top)
On Campus
*SU Affiliate

plus 8% (F&A)
*Non-Profit

plus 54% (F&A)
*Commercial

plus 54% (F&A)
• New Project Consultation
• PCR and Pyrosequencing Run/Sample (one target region):
• first 6 samples (per sample charge per order)
• additional sample (per sample charge per order)
• Run Only:
-- PAN captures biotinylated product and runs client generated PCR products.
• first 6 samples (per sample charge per order)
• additional sample (per sample charge per order)

• Self Service: Instrument Run Only
-- Client prepares and runs plate; Reagents and consumables are not included but can be purchased from PAN.

Inquire
46
17


34
14
42
Inquire
46
17


34
14
42
Inquire
46
17


34
14
42
Inquire
61
21


40
17
52
Next Generation Sequencing (top)
On Campus
*SU Affiliate

plus 8% (F&A)
*Non-Profit

plus 54% (F&A)
*Commercial

plus 54% (F&A)
• Library Prep Services: (Price per Preparation including QC)
• Low Input RNA Library Preparation:
• Clontech SMARTer Stranded Total RNA-Seq
• Clontech SMART-Seq v4 Ultra Low or Pico RNA-Seq
• RNA Library Preparation:
• Illumina TruSeq Stranded Total RNA
• Illumina TruSeq Stranded mRNA
• DNA Library Preparation:
• DNAflex
• Nextera XT DNA
• Targeted Sequence: (Does not include kit)
• 16S Microbiome Amplicon-Seq
• MiSeq Services:
• MiSeq Run Only:
-- Client provides MiSeq reagent kit with samples preloaded into the cartridge.
• 2 x 75 cycles
• 2 x 150 cycles
• 2 x 250 cycles
• 2 x 300 cycles
• Micro 300 cycles
• Nano 300 cycles
• Nano 500 cycles
• MiSeq Full Service: Set-up and Run
-- PAN provides MiSeq reagent kit and initial sample QC on Agilent 2163 Bioanalyzer.
• 2 x 75 cycles
• 2 x 150 cycles
• 2 x 250 cycles
• 2 x 300 cycles
• Micro 300 cycles
• Nano 300 cycles
• Nano 500 cycles

298
298

255
234

199
242
82
170


353
432
607
742
432.60
346
351


1404
1580
1930
2163
761
584
700

298
298

255
234

199
242
82
170


353
432
607
742
432.60
346
351


1404
1580
1930
2163
761
584
700

298
298

255
234

199
242
82
170


353
432
607
742
432.60
346
351


1404
1580
1930
2163
761
584
700

367
367

307
286

240
262
100
203


446
565
771
930
549
438
450


1579
1754
2163
2396
912
700
842
DNA Sequencing & Fragment Analysis (top)
On Campus
*SU Affiliate

plus 8% (F&A)
*Non-Profit

plus 54% (F&A)
*Commercial

plus 54% (F&A)
• DNA (Sanger) Sequencing:
• Per Sample Price:
• Full Service
• Intermediate Service (Clean-up & Run)
• Economy Service (Run Only)
• Per Plate Price:
• Full Service
• Run Only
• Fragment Analysis (GeneScan):
• Per Sample Price:
• Clean-up and Run
• Run only
• Per Plate Price:
• Clean-up and Run
• Run only


8.25
5.90
4.90

580
208


12
9

1000
704



8.25
5.90
4.90

580
208


12
9

1000
704



8.25
5.90
4.90

580
208


12
9

1000
704


9.80
7.20
5.92

620
258


14
9.50

1127
803
Single Cell Genomics (top)
On Campus
*SU Affiliate

plus 8% (F&A)
*Non-Profit

plus 54% (F&A)
*Commercial

plus 54% (F&A)
• Library Prep Services: (Price per Preparation including QC)
• Ultralow Input RNA-Seq: (Clontech SMART-Seq kit)
• Illumina/Biorad ddSEQ Single-Cell RNA-Seq kit
• scATAC-Seq
• BD Rhapsody Single-cell Assays
• Spatial Transcriptomics
•10X Visium
•Vizgen MERSCOPE
• Machine use only (price per run)
• Full Service (price per slide)

Inquire
Inquire
Inquire
Inquire

Inquire

Inquire
Inquire

Inquire
Inquire
Inquire
Inquire

Inquire

Inquire
Inquire

Inquire
Inquire
Inquire
Inquire

Inquire

Inquire
Inquire

Inquire
Inquire
Inquire
Inquire

Inquire

Inquire
Inquire
RNA-DNA QC (top)
On Campus
*SU Affiliate

plus 8% (F&A)
*Non-Profit

plus 54% (F&A)
*Commercial

plus 54% (F&A)
• Agilent Bioanalyzer QC (per sample)
• RNA:
• Nano RNA (up to 12 samples)
         ° each additional sample
• Pico RNA (up to 11 samples)
         ° each additional sample
• Small RNA (up to 121 samples)
         ° each additional sample
• DNA:
• HS DNA (up to 11 samples)
         ° each additional sample
• DNA 1000 (up to 12 samples)
         ° each additional sample
• Fragment Analyzer QC (per 96-well - plate format only)
• Full Service:
-- PAN provides reagents and runs samples
• HS NGS DNA, HS Large Fragment DNA or RNA
• Small RNA
• Run Only :
-- Client provides reagents and PAN runs samples
• Investigator Use:
-- Client provides reagents and runs samples; Training & Expertise required
• Femto Pulse QC- (RNA or DNA analysis)
• Full Service
 -- PAN provides reagents and runs samples
• Run Only
 -- Clients provides reagents and PAN runs samples
• Investigator Use
 -- Client provides reagents and runs samples; Training & Expertise required


23
20
26
22
31
25

31
25
25
22



554
784

145
121

Inquire
Inquire
Inquire


23
20
26
22
31
25

31
25
25
22



554
784

145
121

Inquire
Inquire
Inquire


23
20
26
22
31
25

31
25
25
22



554
784

145
121

Inquire
Inquire
Inquire


28
23
31
26
37
28

37
28
30
26



620
859

166
130

Inquire
Inquire
Inquire
PROTEIN SERVICES
Peptide Synthesis (top)
(Non-purified peptide synthesis includes analytical HPLC and Mass spec QC)
On Campus
*SU Affiliate

plus 8% (F&A)
*Non-Profit

plus 54% (F&A)
*Commercial

plus 54% (F&A)
• 0.1 mmol Scale: (~100mg) - non purified
• Set-up fee (includes first 5 Amino Acids)
• Per additional Amino Acid (>5 AA)
• 0.2 mmol Scale: (200mg - 500mg) - non purified
• Set-up fee (includes first 5 Amino Acids)
• Per additional Amino Acid (>5 AA)
• Special Modification Coupling Fee
• HPLC Purification
• Modification
**Shipping and Handling :
• USA
• International
249
53
368
76
76
386
Inquire
NA
75
249
53
368
76
76
386
Inquire
NA
75

249
53

368
76
76
386
Inquire
43
75

313
66

470
97
97
493
Inquire
43
75
Mass Spectrometry (top)
On Campus
*SU Affiliate

plus 8% (F&A)
*Non-Profit

plus 54% (F&A)
*Commercial

plus 54% (F&A)
• Mass spectrometry by MALDI: (per sample)
• Peptides (500-5000Da)
• Other (including proteins, DNA, polymer, small molecules)
• Prespotted plate
• Zip Tip Cleanup

29
49
21
25

29
49
21
25

29
49
21
25

43
76
29
35
Surface Plasmon Resonance -- Biacore (top)
(Experimental set-up includes generation of biosensor surfaces for ligand capturing: Direct or indirect capture)
On Campus
*SU Affiliate

plus 8% (F&A)
*Non-Profit

plus 54% (F&A)
*Commercial

plus 54% (F&A)
• Set-up fee (per chip, user provides chip)
• Experiment:
• Full-day duration
• Half-day duration
• User-operated instrument session (per hour)
• Biacore 3000
• T200
• User-operated instrument session (per day)
• Biacore 3000
• T200
• Consulting or data analysis (half-day duration)
440
761
381

Inquire
142

Inquire
718
402
440
761
381

Inquire
142

Inquire
718
402
440

761
381

Inquire
142

Inquire
718
402
629

1108
555

Inquire
205

Inquire
1019
578

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